Welcome

cytomine_utils is a Python package for high-level interaction with a Cytomine instance using Python.

The package is esentially a very high level API.

Head over to the reference API page to see all functions available.

Contents

• API
  • cytomine_utils._utils
    • backup_annotations()
    • connect()
    • delete_annotations()
    • delete_image()
    • get_all_images()
    • get_annotations()
    • get_annotations_from_image()
    • get_client()
    • get_credentials()
    • get_current_user()
    • get_image_by_id()
    • get_image_by_name()
    • get_images_of_project()
    • get_ontologies()
    • get_project()
    • get_projects()
    • get_storage()
    • get_term_by_id()
    • get_term_by_name()
    • get_term_id_mapping()
    • get_user_by_id()
    • upload_annotations()
    • upload_image()

Indices and tables

• Index

• Module Index

• Search Page

Links

• Issues and source code: rendeirolab/cytomine_utils